SPRINGS: Prediction of Protein-Protein Interaction Sites Using Artificial Neural Networks
Journal: Journal of Proteomics & Computational Biology (Vol.1, No. 1)Publication Date: 2014-06.30
Authors : Gurdeep Singh Kaustubh Dhole Priyadarshini P. Pai; Sukanta Mondal;
Page : 1-7
Keywords : Leave one out cross validation; Neural networks; Positionspecific scoring matrix; Protein-protein interactions; Sequence-based predictor;
Abstract
Proteins are key players in biological systems orchestrating various mechanisms of life sustenance and growth. They perform such vital functions by concerting interactions with each other forming a network of interplaying agents in regulating as well as facilitating various metabolic functions within and outside of the organisms [1]. Thus, knowledge of protein-protein interactions can provide us with insights into the innate metabolic machinery of living organisms. Further, with newer annotations of protein sequences and structures, mapping protein interaction network has become a coveted aspect of advancing towards its potential applications in proteomics and related fields also [2]. Since protein-protein interaction information allows the function of a protein to be defined by its position in a complex web of interacting proteins, access to such information is believed to have ample role in boosting biological research and drug discovery [3]. These insights can be utilized to develop novel agents for intervening and manipulating the flow of biological information in case of disorders and irregularities [4,5].
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