SOFTWARE APPLICATION FOR FINDING CPG ISLANDS
Journal: International Scientific Journal "Internauka" (Vol.1, No. 105)Publication Date: 2021-04-30
Authors : Klymchuk Mariia; Kysliak Serhii;
Page : 57-62
Keywords : Hidden Markov Models; Viterbi decoding algorithm; CpG-islands; transition and emission probabilities; epigenetics;
Abstract
The article discusses an algorithm for searching for CpG islands using hidden Markov models. The created software product makes it possible to identify protein-coding regions of the genome in accordance with the Viterbi decoding algorithm and to visualize the path of the highest probability in biological sequences of eukaryotes in accordance with the values of the transition and emission probabilities.
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Last modified: 2021-10-12 23:50:28