In silico?enzyme function prediction in?hypothetical proteins of Mycobacterium bovis AF2122/97
Journal: Journal of Pharmacy Research (Vol.9, No. 3)Publication Date: 2015-03-01
Authors : P S Kewate; R C Urade; D G Gore; M A Soni; A P Kopulwar;
Page : 182-189
Keywords : Bioinformatics; Hypothetical proteins; Enzyme conserved domain.;
Abstract
Background: Mycobacterium bovis linked to cause bovine tuberculosis has been investigated and functionally annotated for several hypothetical proteins’ ability of enzyme activity as per the conserved domain present. Methods: As M. bovis genome codes in total 25% hypothetical proteins, we used CDD BLAST, INTERPRSCAN, PFAM and CATH domain search programs to find the enzyme functionality in these proteins. Results and discussion: Programs reported 347 hypothetical proteins posses enzymatic activity as per the enzyme domain conserved in the sequences at variable confidence levels. Conclusion: These proteins could be the markers, to investigate about their fate in the metabolism of M. bovis.
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Last modified: 2015-12-11 23:23:06